disable doc for tools, warn if params miss documentation, convert TODO tags to todo-list

docs/Doxyfile.in

@@ -414,7 +414,7 @@ EXTRACT_PACKAGE        = NO
 # included in the documentation.
 # The default value is: NO.
 
-EXTRACT_STATIC         = NO
+EXTRACT_STATIC         = YES
 
 # If the EXTRACT_LOCAL_CLASSES tag is set to YES classes (and structs) defined
 # locally in source files will be included in the documentation. If set to NO
@@ -705,7 +705,7 @@ WARN_IF_DOC_ERROR      = YES
 # documentation, but not about the absence of documentation.
 # The default value is: NO.
 
-WARN_NO_PARAMDOC       = NO
+WARN_NO_PARAMDOC       = YES
 
 # The WARN_FORMAT tag determines the format of the warning messages that doxygen
 # can produce. The string should contain the $file, $line, and $text tags, which
@@ -768,7 +768,7 @@ RECURSIVE              = YES
 # Note that relative paths are relative to the directory from which doxygen is
 # run.
 
-EXCLUDE                =
+EXCLUDE                = @top_srcdir@/src/tools
 
 # The EXCLUDE_SYMLINKS tag can be used to select whether or not files or
 # directories that are symbolic links (a Unix file system feature) are excluded
@@ -838,7 +838,7 @@ IMAGE_PATH             =
 # code is scanned, but not when the output code is generated. If lines are added
 # or removed, the anchors will not be placed correctly.
 
-INPUT_FILTER           =
+INPUT_FILTER           = "sed -e 's/\/\/.*TODO/\/\/\/ \\todo/'"
 
 # The FILTER_PATTERNS tag can be used to specify filters on a per file pattern
 # basis. Doxygen will compare the file name with each pattern and apply the